Update dependency versions and test workflow configuration (#1322)

* chore: update dependencies in project configuration files

* Add bootstrap step for packaging tools

Added a step to bootstrap packaging tools before installing dependencies.

* Resolve audit issues

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>

.github/workflows/e2e-cache.yml

@@ -145,7 +145,8 @@ jobs:
     steps:
       - uses: actions/checkout@v6
       - name: Install poetry
-        run: pipx install poetry
+        run: |
+          pipx install poetry
       - name: Init pyproject.toml
         run: mv ./__tests__/data/pyproject.toml .
       - name: Setup Python
@@ -153,6 +154,10 @@ jobs:
         with:
           python-version: ${{ matrix.python-version }}
           cache: 'poetry'
+      - name: Bootstrap packaging
+        run: |
+          python -m ensurepip --upgrade
+          python -m pip install --upgrade pip setuptools wheel packaging
       - name: Install dependencies
         run: poetry install --no-root
 

.github/workflows/test-pypy.yml

@@ -40,7 +40,7 @@ jobs:
           - 'pypy-3.10-v7.3.x'
           - 'pypy-3.10-v7.x'
           - 'pypy-2.7-v7.3.12rc1'
-          - 'pypy-3.10-nightly'
+          - 'pypy-3.11-nightly'
           - 'pypy3.10-v7.3.17'
           - 'pypy3.11-v7.3.19'
 
@@ -146,7 +146,7 @@ jobs:
             ubuntu-latest,
             macos-15-intel
           ]
-        pypy: ['pypy2.7', 'pypy3.9', 'pypy3.10-nightly', 'pypy3.11']
+        pypy: ['pypy2.7', 'pypy3.9', 'pypy3.11-nightly', 'pypy3.11']
 
     steps:
       - name: Checkout